IL_7AQD_082
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 7AQD|1|A|A|1967, 7AQD|1|A|U|1973
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AQD_082 not in the Motif Atlas
- Geometric match to IL_7A0S_072
- Geometric discrepancy: 0.1875
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
7AQD|1|A|C|1963
7AQD|1|A|G|1964
7AQD|1|A|A|1965
7AQD|1|A|A|1966
7AQD|1|A|A|1967
7AQD|1|A|U|1968
7AQD|1|A|U|1969
7AQD|1|A|C|1970
7AQD|1|A|C|1971
7AQD|1|A|U|1972
7AQD|1|A|U|1973
7AQD|1|A|G|1974
*
7AQD|1|A|C|1990
7AQD|1|A|C|1991
7AQD|1|A|C|1992
7AQD|1|A|G|1993
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain T
- Transfer RNA; tRNA
Coloring options: