IL_7AS8_018
3D structure
- PDB id
- 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAG*CGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AS8_018 not in the Motif Atlas
- Homologous match to IL_5J7L_258
- Geometric discrepancy: 0.1397
- The information below is about IL_5J7L_258
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7AS8|1|A|U|650
7AS8|1|A|U|651
7AS8|1|A|A|652
7AS8|1|A|A|653
7AS8|1|A|G|654
*
7AS8|1|A|C|664
7AS8|1|A|G|665
7AS8|1|A|G|666
7AS8|1|A|A|667
7AS8|1|A|G|668
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L4
- Chain P
- 50S ribosomal protein L15
Coloring options: