IL_7AS8_023

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AS8_023 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.1184

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7AS8|1|A|U|750
7AS8|1|A|G|751
7AS8|1|A|A|752
7AS8|1|A|A|753
7AS8|1|A|G|754
*
7AS8|1|A|U|771
7AS8|1|A|G|772
7AS8|1|A|G|773
7AS8|1|A|A|774
7AS8|1|A|G|775

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L2