IL_7AS8_056

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAUG*CUAG

Length

9 nucleotides

Bulged bases

7AS8|1|A|U|1466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AS8_056 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.3164

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7AS8|1|A|C|1463
7AS8|1|A|A|1464
7AS8|1|A|A|1465
7AS8|1|A|U|1466
7AS8|1|A|G|1467
*
7AS8|1|A|C|1625
7AS8|1|A|U|1626
7AS8|1|A|A|1627
7AS8|1|A|G|1628

Current chains

Chain A

23S rRNA

Nearby chains