IL_7ASM_017
3D structure
- PDB id
- 7ASM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- UUAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASM_017 not in the Motif Atlas
- Homologous match to IL_4WF9_019
- Geometric discrepancy: 0.0925
- The information below is about IL_4WF9_019
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ASM|1|A|U|649
7ASM|1|A|U|650
7ASM|1|A|A|651
7ASM|1|A|A|652
7ASM|1|A|G|653
*
7ASM|1|A|U|663
7ASM|1|A|G|664
7ASM|1|A|G|665
7ASM|1|A|A|666
7ASM|1|A|G|667
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L15
Coloring options: