IL_7ASM_022

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASM_022 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.0758

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7ASM|1|A|U|748
7ASM|1|A|G|749
7ASM|1|A|A|750
7ASM|1|A|A|751
7ASM|1|A|G|752
*
7ASM|1|A|U|769
7ASM|1|A|G|770
7ASM|1|A|G|771
7ASM|1|A|A|772
7ASM|1|A|G|773

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2