3D structure

PDB id
7ASM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 50S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
CGAUG*CUAG
Length
9 nucleotides
Bulged bases
7ASM|1|A|U|1464
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ASM_051 not in the Motif Atlas
Homologous match to IL_4WF9_054
Geometric discrepancy: 0.3526
The information below is about IL_4WF9_054
Detailed Annotation
Other IL
Broad Annotation
Other IL
Motif group
IL_99646.2
Basepair signature
cWW-tWH-tHS-cWW
Number of instances in this motif group
6

Unit IDs

7ASM|1|A|C|1461
7ASM|1|A|G|1462
7ASM|1|A|A|1463
7ASM|1|A|U|1464
7ASM|1|A|G|1465
*
7ASM|1|A|C|1624
7ASM|1|A|U|1625
7ASM|1|A|A|1626
7ASM|1|A|G|1627

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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