IL_7ASN_023

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GCG*CAAUC

Length

8 nucleotides

Bulged bases

7ASN|1|A|C|821, 7ASN|1|A|A|833, 7ASN|1|A|A|834, 7ASN|1|A|U|835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_023 not in the Motif Atlas

Homologous match to IL_7RQB_023

Geometric discrepancy: 0.126

The information below is about IL_7RQB_023

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.6

Basepair signature

cWW-cWW

Number of instances in this motif group

7

Unit IDs

7ASN|1|A|G|820
7ASN|1|A|C|821
7ASN|1|A|G|822
*
7ASN|1|A|C|832
7ASN|1|A|A|833
7ASN|1|A|A|834
7ASN|1|A|U|835
7ASN|1|A|C|836

Current chains

Chain A

23S

Nearby chains

Chain 2

50S ribosomal protein L34

Chain F

50S ribosomal protein L2

Chain Q

50S ribosomal protein L22