IL_7ASN_038

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

7ASN|1|A|G|1286

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_038 not in the Motif Atlas

Homologous match to IL_4WF9_044

Geometric discrepancy: 0.0947

The information below is about IL_4WF9_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.6

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

26

Unit IDs

7ASN|1|A|C|1235
7ASN|1|A|G|1236
7ASN|1|A|U|1237
*
7ASN|1|A|A|1285
7ASN|1|A|G|1286
7ASN|1|A|U|1287
7ASN|1|A|G|1288

Current chains

Chain A

23S

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15

Chain O

50S ribosomal protein L20