IL_7ASN_043

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GGAAG*CGC

Length

8 nucleotides

Bulged bases

7ASN|1|A|G|1369

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_043 not in the Motif Atlas

Homologous match to IL_4WF9_050

Geometric discrepancy: 0.1472

The information below is about IL_4WF9_050

Detailed Annotation

Major groove minor groove platform with tHH

Broad Annotation

No text annotation

Motif group

IL_06671.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

11

Unit IDs

7ASN|1|A|G|1356
7ASN|1|A|G|1357
7ASN|1|A|A|1358
7ASN|1|A|A|1359
7ASN|1|A|G|1360
*
7ASN|1|A|C|1368
7ASN|1|A|G|1369
7ASN|1|A|C|1370

Current chains

Chain A

23S

Nearby chains

Chain Q

50S ribosomal protein L22