IL_7ASN_048

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GCGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_048 not in the Motif Atlas

Homologous match to IL_4WF9_062

Geometric discrepancy: 0.1614

The information below is about IL_4WF9_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.5

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

7ASN|1|A|G|1695
7ASN|1|A|C|1696
7ASN|1|A|G|1697
7ASN|1|A|A|1698
7ASN|1|A|A|1699
7ASN|1|A|C|1700
*
7ASN|1|A|G|2031
7ASN|1|A|A|2032
7ASN|1|A|C|2033

Current chains

Chain A

23S

Nearby chains

Chain D

50S ribosomal protein L3