IL_7ASN_054

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CGAAA(5MU)UCCUUG*CCCG

Length

16 nucleotides

Bulged bases

7ASN|1|A|A|1965, 7ASN|1|A|U|1971

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_054 not in the Motif Atlas

Homologous match to IL_5J7L_319

Geometric discrepancy: 0.4273

The information below is about IL_5J7L_319

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42218.2

Basepair signature

cWW-L-R-cHW-cWW-L-L-L-R-L

Number of instances in this motif group

5

Unit IDs

7ASN|1|A|C|1961
7ASN|1|A|G|1962
7ASN|1|A|A|1963
7ASN|1|A|A|1964
7ASN|1|A|A|1965
7ASN|1|A|5MU|1966
7ASN|1|A|U|1967
7ASN|1|A|C|1968
7ASN|1|A|C|1969
7ASN|1|A|U|1970
7ASN|1|A|U|1971
7ASN|1|A|G|1972
*
7ASN|1|A|C|1988
7ASN|1|A|C|1989
7ASN|1|A|C|1990
7ASN|1|A|G|1991

Current chains

Chain A

23S

Nearby chains