IL_7ASN_060

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UAG*CGGG

Length

7 nucleotides

Bulged bases

7ASN|1|A|G|2265

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_060 not in the Motif Atlas

Homologous match to IL_7A0S_077

Geometric discrepancy: 0.1676

The information below is about IL_7A0S_077

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_87316.3

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7ASN|1|A|U|2108
7ASN|1|A|A|2109
7ASN|1|A|G|2110
*
7ASN|1|A|C|2263
7ASN|1|A|G|2264
7ASN|1|A|G|2265
7ASN|1|A|G|2266

Current chains

Chain A

23S

Nearby chains

Chain F

50S ribosomal protein L2

Chain V

50S ribosomal protein L28