IL_7ASN_066

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

7ASN|1|A|U|2429

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_066 not in the Motif Atlas

Homologous match to IL_4WF9_088

Geometric discrepancy: 0.3453

The information below is about IL_4WF9_088

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

7ASN|1|A|U|2428
7ASN|1|A|U|2429
7ASN|1|A|C|2430
*
7ASN|1|A|G|2441
7ASN|1|A|G|2442

Current chains

Chain A

23S

Nearby chains

Chain 1

50S ribosomal protein L33

Chain L

50S ribosomal protein L15