IL_7ASN_070

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CUCC*GAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_070 not in the Motif Atlas

Geometric match to IL_1MFQ_004

Geometric discrepancy: 0.1789

The information below is about IL_1MFQ_004

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.3

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

38

Unit IDs

7ASN|1|A|C|2488
7ASN|1|A|U|2489
7ASN|1|A|C|2490
7ASN|1|A|C|2491
*
7ASN|1|A|G|2514
7ASN|1|A|A|2515
7ASN|1|A|G|2516
7ASN|1|A|G|2517

Current chains

Chain A

23S

Nearby chains

Chain Y

50S ribosomal protein L16