IL_7ASN_078

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UGUCC*GAUGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASN_078 not in the Motif Atlas

Geometric match to IL_9JA9_001

Geometric discrepancy: 0.3683

The information below is about IL_9JA9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71154.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

18

Unit IDs

7ASN|1|A|U|2674
7ASN|1|A|G|2675
7ASN|1|A|U|2676
7ASN|1|A|C|2677
7ASN|1|A|C|2678
*
7ASN|1|A|G|2697
7ASN|1|A|A|2698
7ASN|1|A|U|2699
7ASN|1|A|G|2700
7ASN|1|A|G|2701

Current chains

Chain A

23S

Nearby chains

Chain G

50S ribosomal protein L14