IL_7ASO_048

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GCG*CAAUC

Length

8 nucleotides

Bulged bases

7ASO|1|Y|C|821, 7ASO|1|Y|A|833, 7ASO|1|Y|A|834

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_048 not in the Motif Atlas

Homologous match to IL_7RQB_023

Geometric discrepancy: 0.197

The information below is about IL_7RQB_023

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.6

Basepair signature

cWW-cWW

Number of instances in this motif group

7

Unit IDs

7ASO|1|Y|G|820
7ASO|1|Y|C|821
7ASO|1|Y|G|822
*
7ASO|1|Y|C|832
7ASO|1|Y|A|833
7ASO|1|Y|A|834
7ASO|1|Y|U|835
7ASO|1|Y|C|836

Current chains

Chain Y

23S

Nearby chains

Chain V

50S ribosomal protein L22

Chain i

50S ribosomal protein L34