IL_7ASO_054
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_054 not in the Motif Atlas
- Homologous match to IL_4WF9_033
- Geometric discrepancy: 0.115
- The information below is about IL_4WF9_033
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ASO|1|Y|G|909
7ASO|1|Y|C|910
7ASO|1|Y|A|911
7ASO|1|Y|C|912
7ASO|1|Y|U|913
*
7ASO|1|Y|A|954
7ASO|1|Y|A|955
7ASO|1|Y|A|956
7ASO|1|Y|C|957
Current chains
- Chain Y
- 23S
Nearby chains
- Chain C
- 5S ribosomal RNA; 5S rRNA
- Chain P
- 50S ribosomal protein L16
Coloring options: