IL_7ASO_059

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

7ASO|1|Y|A|1187

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_059 not in the Motif Atlas

Homologous match to IL_4WF9_039

Geometric discrepancy: 0.1427

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7ASO|1|Y|U|1062
7ASO|1|Y|U|1063
7ASO|1|Y|A|1064
7ASO|1|Y|A|1065
7ASO|1|Y|G|1066
7ASO|1|Y|U|1067
7ASO|1|Y|G|1068
*
7ASO|1|Y|C|1184
7ASO|1|Y|U|1185
7ASO|1|Y|A|1186
7ASO|1|Y|A|1187
7ASO|1|Y|A|1188

Current chains

Chain Y

23S

Nearby chains

Chain M

50S ribosomal protein L13

Chain k

50S ribosomal protein L36