IL_7ASO_072

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UAA*UCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_072 not in the Motif Atlas

Homologous match to IL_4WF9_063

Geometric discrepancy: 0.1634

The information below is about IL_4WF9_063

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

7ASO|1|Y|U|1707
7ASO|1|Y|A|1708
7ASO|1|Y|A|1709
*
7ASO|1|Y|U|2022
7ASO|1|Y|C|2023
7ASO|1|Y|A|2024

Current chains

Chain Y

23S

Nearby chains

Chain N

50S ribosomal protein L14

Chain e

50S ribosomal protein L3