IL_7ASO_083
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 7ASO|1|Y|A|1965, 7ASO|1|Y|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_083 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.1959
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
7ASO|1|Y|C|1961
7ASO|1|Y|G|1962
7ASO|1|Y|A|1963
7ASO|1|Y|A|1964
7ASO|1|Y|A|1965
7ASO|1|Y|U|1966
7ASO|1|Y|U|1967
7ASO|1|Y|C|1968
7ASO|1|Y|C|1969
7ASO|1|Y|U|1970
7ASO|1|Y|U|1971
7ASO|1|Y|G|1972
*
7ASO|1|Y|C|1988
7ASO|1|Y|C|1989
7ASO|1|Y|C|1990
7ASO|1|Y|G|1991
Current chains
- Chain Y
- 23S
Nearby chains
- Chain X
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: