IL_7ASO_100
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_100 not in the Motif Atlas
- Homologous match to IL_4WF9_093
- Geometric discrepancy: 0.2282
- The information below is about IL_4WF9_093
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7ASO|1|Y|C|2493
7ASO|1|Y|C|2494
7ASO|1|Y|A|2495
7ASO|1|Y|A|2496
7ASO|1|Y|G|2497
*
7ASO|1|Y|C|2507
7ASO|1|Y|G|2508
7ASO|1|Y|A|2509
7ASO|1|Y|C|2510
7ASO|1|Y|G|2511
Current chains
- Chain Y
- 23S
Nearby chains
- Chain P
- 50S ribosomal protein L16
- Chain k
- 50S ribosomal protein L36
Coloring options: