IL_7ASO_121

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

AUGUGAAAGCCCAC*GUGGAGGGUCAUU

Length

27 nucleotides

Bulged bases

7ASO|1|X|U|613, 7ASO|1|X|G|614, 7ASO|1|X|C|620, 7ASO|1|X|G|640, 7ASO|1|X|U|641, 7ASO|1|X|A|643

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|X|A|610
7ASO|1|X|U|611
7ASO|1|X|G|612
7ASO|1|X|U|613
7ASO|1|X|G|614
7ASO|1|X|A|615
7ASO|1|X|A|616
7ASO|1|X|A|617
7ASO|1|X|G|618
7ASO|1|X|C|619
7ASO|1|X|C|620
7ASO|1|X|C|621
7ASO|1|X|A|622
7ASO|1|X|C|623
*
7ASO|1|X|G|633
7ASO|1|X|U|634
7ASO|1|X|G|635
7ASO|1|X|G|636
7ASO|1|X|A|637
7ASO|1|X|G|638
7ASO|1|X|G|639
7ASO|1|X|G|640
7ASO|1|X|U|641
7ASO|1|X|C|642
7ASO|1|X|A|643
7ASO|1|X|U|644
7ASO|1|X|U|645

Current chains

Chain X

16S

Nearby chains

Chain 7

30S ribosomal protein S16

Chain 8

30S ribosomal protein S17

Chain l

30S ribosomal protein S4