IL_7ASO_124

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UUAAGCUUAGUUGCCAUCAUUAAGUUGGGCACUCUAAGUUGACUGCCGG*CCGGAGGAAGGUGG

Length

63 nucleotides

Bulged bases

7ASO|1|X|G|1136, 7ASO|1|X|G|1139, 7ASO|1|X|U|1143, 7ASO|1|X|C|1144, 7ASO|1|X|A|1145, 7ASO|1|X|U|1146, 7ASO|1|X|U|1147, 7ASO|1|X|A|1148, 7ASO|1|X|G|1150, 7ASO|1|X|G|1155, 7ASO|1|X|G|1185, 7ASO|1|X|U|1194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|X|U|1127
7ASO|1|X|U|1128
7ASO|1|X|A|1129
7ASO|1|X|A|1130
7ASO|1|X|G|1131
7ASO|1|X|C|1132
7ASO|1|X|U|1133
7ASO|1|X|U|1134
7ASO|1|X|A|1135
7ASO|1|X|G|1136
7ASO|1|X|U|1137
7ASO|1|X|U|1138
7ASO|1|X|G|1139
7ASO|1|X|C|1140
7ASO|1|X|C|1141
7ASO|1|X|A|1142
7ASO|1|X|U|1143
7ASO|1|X|C|1144
7ASO|1|X|A|1145
7ASO|1|X|U|1146
7ASO|1|X|U|1147
7ASO|1|X|A|1148
7ASO|1|X|A|1149
7ASO|1|X|G|1150
7ASO|1|X|U|1151
7ASO|1|X|U|1152
7ASO|1|X|G|1153
7ASO|1|X|G|1154
7ASO|1|X|G|1155
7ASO|1|X|C|1156
7ASO|1|X|A|1157
7ASO|1|X|C|1158
7ASO|1|X|U|1159
7ASO|1|X|C|1160
7ASO|1|X|U|1161
7ASO|1|X|A|1162
7ASO|1|X|A|1163
7ASO|1|X|G|1164
7ASO|1|X|U|1165
7ASO|1|X|U|1166
7ASO|1|X|G|1167
7ASO|1|X|A|1168
7ASO|1|X|C|1169
7ASO|1|X|U|1170
7ASO|1|X|G|1171
7ASO|1|X|C|1172
7ASO|1|X|C|1173
7ASO|1|X|G|1174
7ASO|1|X|G|1175
*
7ASO|1|X|C|1183
7ASO|1|X|C|1184
7ASO|1|X|G|1185
7ASO|1|X|G|1186
7ASO|1|X|A|1187
7ASO|1|X|G|1188
7ASO|1|X|G|1189
7ASO|1|X|A|1190
7ASO|1|X|A|1191
7ASO|1|X|G|1192
7ASO|1|X|G|1193
7ASO|1|X|U|1194
7ASO|1|X|G|1195
7ASO|1|X|G|1196

Current chains

Chain X

16S

Nearby chains

Chain 1

30S ribosomal protein S10

Chain 5

30S ribosomal protein S14 type Z

Chain G

30S ribosomal protein S7

Chain H

30S ribosomal protein S9