IL_7ASO_125

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CACGAGGUUUGUAACAC*GUGGGACAAAUGGGG

Length

32 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|X|C|1423
7ASO|1|X|A|1424
7ASO|1|X|C|1425
7ASO|1|X|G|1426
7ASO|1|X|A|1427
7ASO|1|X|G|1428
7ASO|1|X|G|1430
7ASO|1|X|U|1431
7ASO|1|X|U|1432
7ASO|1|X|U|1433
7ASO|1|X|G|1434
7ASO|1|X|U|1435
7ASO|1|X|A|1436
7ASO|1|X|A|1437
7ASO|1|X|C|1438
7ASO|1|X|A|1439
7ASO|1|X|C|1440
*
7ASO|1|X|G|1483
7ASO|1|X|U|1484
7ASO|1|X|G|1485
7ASO|1|X|G|1486
7ASO|1|X|G|1487
7ASO|1|X|A|1488
7ASO|1|X|C|1489
7ASO|1|X|A|1490
7ASO|1|X|A|1491
7ASO|1|X|A|1492
7ASO|1|X|U|1493
7ASO|1|X|G|1494
7ASO|1|X|G|1498
7ASO|1|X|G|1499
7ASO|1|X|G|1500

Current chains

Chain X

16S

Nearby chains

Chain 3

30S ribosomal protein S12

Chain N

50S ribosomal protein L14

Chain Y

Large subunit ribosomal RNA; LSU rRNA