IL_7ASO_129

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CUAGAGUUACAAAGGACGACAU*AUGUUGUCUCUCUUG

Length

37 nucleotides

Bulged bases

7ASO|1|Y|U|321, 7ASO|1|Y|A|322, 7ASO|1|Y|G|328, 7ASO|1|Y|U|395

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|Y|C|310
7ASO|1|Y|U|311
7ASO|1|Y|A|312
7ASO|1|Y|G|317
7ASO|1|Y|A|318
7ASO|1|Y|G|319
7ASO|1|Y|U|320
7ASO|1|Y|U|321
7ASO|1|Y|A|322
7ASO|1|Y|C|323
7ASO|1|Y|A|324
7ASO|1|Y|A|325
7ASO|1|Y|A|326
7ASO|1|Y|G|327
7ASO|1|Y|G|328
7ASO|1|Y|A|329
7ASO|1|Y|C|330
7ASO|1|Y|G|331
7ASO|1|Y|A|332
7ASO|1|Y|C|333
7ASO|1|Y|A|334
7ASO|1|Y|U|335
*
7ASO|1|Y|A|391
7ASO|1|Y|U|392
7ASO|1|Y|G|393
7ASO|1|Y|U|394
7ASO|1|Y|U|395
7ASO|1|Y|G|396
7ASO|1|Y|U|397
7ASO|1|Y|C|398
7ASO|1|Y|U|399
7ASO|1|Y|C|400
7ASO|1|Y|U|401
7ASO|1|Y|C|402
7ASO|1|Y|U|403
7ASO|1|Y|U|404
7ASO|1|Y|G|405

Current chains

Chain Y

23S

Nearby chains