IL_7ASO_133

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GUC*GAAC

Length

7 nucleotides

Bulged bases

7ASO|1|Y|A|809

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_133 not in the Motif Atlas

Geometric match to IL_4V88_467

Geometric discrepancy: 0.2281

The information below is about IL_4V88_467

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ASO|1|Y|G|741
7ASO|1|Y|U|742
7ASO|1|Y|C|743
*
7ASO|1|Y|G|808
7ASO|1|Y|A|809
7ASO|1|Y|A|810
7ASO|1|Y|C|811

Current chains

Chain Y

23S

Nearby chains