IL_7ASO_135

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UAU*AUUA

Length

7 nucleotides

Bulged bases

7ASO|1|Y|U|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_135 not in the Motif Atlas

Homologous match to IL_7A0S_026

Geometric discrepancy: 0.4904

The information below is about IL_7A0S_026

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7ASO|1|Y|U|896
7ASO|1|Y|A|897
7ASO|1|Y|U|898
*
7ASO|1|Y|A|969
7ASO|1|Y|U|970
7ASO|1|Y|U|971
7ASO|1|Y|A|972

Current chains

Chain Y

23S

Nearby chains

Chain b

50S ribosomal protein L27

Chain f

50S ribosomal protein L30