IL_7ASO_138

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

AUAU*AUU

Length

7 nucleotides

Bulged bases

7ASO|1|Y|U|1056

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_138 not in the Motif Atlas

Geometric match to IL_5TBW_042

Geometric discrepancy: 0.1753

The information below is about IL_5TBW_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ASO|1|Y|A|1055
7ASO|1|Y|U|1056
7ASO|1|Y|A|1057
7ASO|1|Y|U|1058
*
7ASO|1|Y|A|1192
7ASO|1|Y|U|1193
7ASO|1|Y|U|1194

Current chains

Chain Y

23S

Nearby chains

Chain M

50S ribosomal protein L13

Chain S

50S ribosomal protein L20