IL_7ASO_140

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UAUAAUCGAUGG*CUAGAUAGAAAAUA

Length

26 nucleotides

Bulged bases

7ASO|1|Y|G|1462, 7ASO|1|Y|A|1463, 7ASO|1|Y|U|1464, 7ASO|1|Y|A|1630, 7ASO|1|Y|G|1631, 7ASO|1|Y|A|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|Y|U|1446
7ASO|1|Y|A|1447
7ASO|1|Y|U|1448
7ASO|1|Y|A|1449
7ASO|1|Y|A|1459
7ASO|1|Y|U|1460
7ASO|1|Y|C|1461
7ASO|1|Y|G|1462
7ASO|1|Y|A|1463
7ASO|1|Y|U|1464
7ASO|1|Y|G|1465
7ASO|1|Y|G|1466
*
7ASO|1|Y|C|1624
7ASO|1|Y|U|1625
7ASO|1|Y|A|1626
7ASO|1|Y|G|1627
7ASO|1|Y|A|1628
7ASO|1|Y|U|1629
7ASO|1|Y|A|1630
7ASO|1|Y|G|1631
7ASO|1|Y|A|1632
7ASO|1|Y|A|1633
7ASO|1|Y|A|1634
7ASO|1|Y|A|1635
7ASO|1|Y|U|1636
7ASO|1|Y|A|1637

Current chains

Chain Y

23S

Nearby chains