3D structure

PDB id
7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
UAGGAUAGGGAAGCGUUGGAUUGCACGUC*GGGAGAAGACCGAGUCGUUGAUUUCACA
Length
57 nucleotides
Bulged bases
7ASO|1|Y|U|1498, 7ASO|1|Y|U|1503, 7ASO|1|Y|U|1602, 7ASO|1|Y|C|1606
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASO|1|Y|U|1477
7ASO|1|Y|A|1478
7ASO|1|Y|G|1479
7ASO|1|Y|G|1480
7ASO|1|Y|A|1481
7ASO|1|Y|U|1482
7ASO|1|Y|A|1483
7ASO|1|Y|G|1484
7ASO|1|Y|G|1485
7ASO|1|Y|G|1487
7ASO|1|Y|A|1488
7ASO|1|Y|A|1489
7ASO|1|Y|G|1490
7ASO|1|Y|C|1491
7ASO|1|Y|G|1492
7ASO|1|Y|U|1498
7ASO|1|Y|U|1499
7ASO|1|Y|G|1500
7ASO|1|Y|G|1501
7ASO|1|Y|A|1502
7ASO|1|Y|U|1503
7ASO|1|Y|U|1504
7ASO|1|Y|G|1505
7ASO|1|Y|C|1506
7ASO|1|Y|A|1507
7ASO|1|Y|C|1508
7ASO|1|Y|G|1509
7ASO|1|Y|U|1510
7ASO|1|Y|C|1511
*
7ASO|1|Y|G|1570
7ASO|1|Y|G|1571
7ASO|1|Y|G|1572
7ASO|1|Y|A|1573
7ASO|1|Y|G|1574
7ASO|1|Y|A|1575
7ASO|1|Y|A|1576
7ASO|1|Y|G|1577
7ASO|1|Y|A|1578
7ASO|1|Y|C|1579
7ASO|1|Y|C|1590
7ASO|1|Y|G|1591
7ASO|1|Y|A|1592
7ASO|1|Y|G|1593
7ASO|1|Y|U|1594
7ASO|1|Y|C|1595
7ASO|1|Y|G|1596
7ASO|1|Y|U|1597
7ASO|1|Y|U|1598
7ASO|1|Y|G|1599
7ASO|1|Y|A|1600
7ASO|1|Y|U|1601
7ASO|1|Y|U|1602
7ASO|1|Y|U|1603
7ASO|1|Y|C|1604
7ASO|1|Y|A|1605
7ASO|1|Y|C|1606
7ASO|1|Y|A|1607

Current chains

Chain Y
23S

Nearby chains

Chain Q
50S ribosomal protein L17

Coloring options:

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