3D structure

PDB id
7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CUCAAAGGUUCCCUC*GAGUG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASO|1|Y|C|2310
7ASO|1|Y|U|2311
7ASO|1|Y|C|2312
7ASO|1|Y|A|2313
7ASO|1|Y|A|2314
7ASO|1|Y|A|2315
7ASO|1|Y|G|2316
7ASO|1|Y|G|2317
7ASO|1|Y|U|2318
7ASO|1|Y|U|2319
7ASO|1|Y|C|2320
7ASO|1|Y|C|2321
7ASO|1|Y|C|2322
7ASO|1|Y|U|2323
7ASO|1|Y|C|2324
*
7ASO|1|Y|G|2348
7ASO|1|Y|A|2349
7ASO|1|Y|G|2350
7ASO|1|Y|U|2351
7ASO|1|Y|G|2352

Current chains

Chain Y
23S

Nearby chains

Chain C
5S ribosomal RNA; 5S rRNA
Chain K
50S ribosomal protein L5
Chain R
50S ribosomal protein L18
Chain T
50S ribosomal protein L33

Coloring options:

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