IL_7ASP_032
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_032 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.3581
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_97631.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
7ASP|1|X|C|1441
7ASP|1|X|C|1442
7ASP|1|X|G|1443
7ASP|1|X|A|1444
7ASP|1|X|A|1445
7ASP|1|X|G|1446
*
7ASP|1|X|C|1478
7ASP|1|X|G|1479
7ASP|1|X|A|1480
7ASP|1|X|A|1481
7ASP|1|X|G|1482
Current chains
- Chain X
- 16S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L19
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: