IL_7ASP_056
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_056 not in the Motif Atlas
- Homologous match to IL_4WF9_033
- Geometric discrepancy: 0.1111
- The information below is about IL_4WF9_033
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ASP|1|Y|G|909
7ASP|1|Y|C|910
7ASP|1|Y|A|911
7ASP|1|Y|C|912
7ASP|1|Y|U|913
*
7ASP|1|Y|A|954
7ASP|1|Y|A|955
7ASP|1|Y|A|956
7ASP|1|Y|C|957
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain K
- 50S ribosomal protein L16
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