IL_7ASP_075

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASP_075 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.5013

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7ASP|1|Y|C|1461
7ASP|1|Y|G|1462
7ASP|1|Y|A|1463
7ASP|1|Y|U|1464
7ASP|1|Y|G|1465
*
7ASP|1|Y|C|1624
7ASP|1|Y|U|1625
7ASP|1|Y|A|1626
7ASP|1|Y|G|1627

Current chains

Chain Y

23S rRNA

Nearby chains