IL_7ASP_108
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_108 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.3266
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
7ASP|1|Y|C|2493
7ASP|1|Y|C|2494
7ASP|1|Y|A|2495
7ASP|1|Y|A|2496
7ASP|1|Y|G|2497
*
7ASP|1|Y|C|2507
7ASP|1|Y|G|2508
7ASP|1|Y|A|2509
7ASP|1|Y|C|2510
7ASP|1|Y|G|2511
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain K
- 50S ribosomal protein L16
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