IL_7ASP_132
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- ACGUUACUAACGACGAUAUGC*GAUUU
- Length
- 26 nucleotides
- Bulged bases
- 7ASP|1|Y|U|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_132 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.3712
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
7ASP|1|Y|A|56
7ASP|1|Y|C|57
7ASP|1|Y|G|58
7ASP|1|Y|U|59
7ASP|1|Y|U|60
7ASP|1|Y|A|61
7ASP|1|Y|C|62
7ASP|1|Y|U|63
7ASP|1|Y|A|64
7ASP|1|Y|A|65
7ASP|1|Y|C|66
7ASP|1|Y|G|67
7ASP|1|Y|A|68
7ASP|1|Y|C|69
7ASP|1|Y|G|70
7ASP|1|Y|A|71
7ASP|1|Y|U|72
7ASP|1|Y|A|73
7ASP|1|Y|U|74
7ASP|1|Y|G|75
7ASP|1|Y|C|76
*
7ASP|1|Y|G|109
7ASP|1|Y|A|110
7ASP|1|Y|U|111
7ASP|1|Y|U|112
7ASP|1|Y|U|113
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L34
- Chain R
- 50S ribosomal protein L23
- Chain W
- 50S ribosomal protein L29
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