IL_7AZO_016

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

7AZO|1|16SA|G|1029

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_016 not in the Motif Atlas

Geometric match to IL_4LFB_016

Geometric discrepancy: 0.0882

The information below is about IL_4LFB_016

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

7AZO|1|16SA|U|1016
7AZO|1|16SA|G|1017
*
7AZO|1|16SA|U|1028
7AZO|1|16SA|G|1029
7AZO|1|16SA|A|1030

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain S16A

30S ribosomal protein S16