IL_7AZO_018
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGACG*CGGUAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_018 not in the Motif Atlas
- Geometric match to IL_4LFB_018
- Geometric discrepancy: 0.1522
- The information below is about IL_4LFB_018
- Detailed Annotation
- 6x5 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_82100.1
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AZO|1|16SA|G|1086
7AZO|1|16SA|G|1087
7AZO|1|16SA|A|1088
7AZO|1|16SA|C|1089
7AZO|1|16SA|G|1090
*
7AZO|1|16SA|C|1113
7AZO|1|16SA|G|1114
7AZO|1|16SA|G|1115
7AZO|1|16SA|U|1116
7AZO|1|16SA|A|1117
7AZO|1|16SA|C|1118
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain L9B
- 50S ribosomal protein L9
- Chain S16A
- 30S ribosomal protein S16
- Chain S4A
- 30S ribosomal protein S4
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