IL_7AZO_036

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

7AZO|1|16SA|G|1549

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_036 not in the Motif Atlas

Homologous match to IL_5J7L_040

Geometric discrepancy: 0.0743

The information below is about IL_5J7L_040

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

7AZO|1|16SA|G|1548
7AZO|1|16SA|G|1549
7AZO|1|16SA|G|1550
*
7AZO|1|16SA|U|2018
7AZO|1|16SA|U|2019

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain MRNA

RNA (30-MER)