IL_7AZO_044
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 7AZO|1|16SA|U|1823
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_044 not in the Motif Atlas
- Homologous match to IL_4LFB_046
- Geometric discrepancy: 0.0828
- The information below is about IL_4LFB_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 129
Unit IDs
7AZO|1|16SA|C|1688
7AZO|1|16SA|G|1689
*
7AZO|1|16SA|C|1822
7AZO|1|16SA|U|1823
7AZO|1|16SA|G|1824
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ASIA
- Transfer RNA; tRNA
- Chain MRNA
- RNA (30-MER)
- Chain S10A
- 30S ribosomal protein S10
- Chain S14A
- 30S ribosomal protein S14 type Z
- Chain S3A
- 30S ribosomal protein S3
- Chain S5A
- 30S ribosomal protein S5
- Chain S9A
- 30S ribosomal protein S9
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