IL_7AZO_045
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_045 not in the Motif Atlas
- Geometric match to IL_4LFB_047
- Geometric discrepancy: 0.0926
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 28
Unit IDs
7AZO|1|16SA|G|1689
7AZO|1|16SA|U|1690
7AZO|1|16SA|C|1691
*
7AZO|1|16SA|G|1820
7AZO|1|16SA|U|1821
7AZO|1|16SA|C|1822
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain MRNA
- RNA (30-MER)
- Chain S10A
- 30S ribosomal protein S10
- Chain S14A
- 30S ribosomal protein S14 type Z
- Chain S3A
- 30S ribosomal protein S3
- Chain S5A
- 30S ribosomal protein S5
- Chain S9A
- 30S ribosomal protein S9
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