IL_7AZO_102

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_102 not in the Motif Atlas

Homologous match to IL_4LFB_043

Geometric discrepancy: 0.1656

The information below is about IL_4LFB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|16SB|G|1678
7AZO|1|16SB|C|1679
7AZO|1|16SB|U|1680
*
7AZO|1|16SB|G|1833
7AZO|1|16SB|2MG|1834
7AZO|1|16SB|C|1835

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain ASIB

Transfer RNA; tRNA

Chain S14B

30S ribosomal protein S14 type Z

Chain S3B

30S ribosomal protein S3