IL_7AZO_127
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_127 not in the Motif Atlas
- Geometric match to IL_7RQB_006
- Geometric discrepancy: 0.0528
- The information below is about IL_7RQB_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7AZO|1|23SA|G|178
7AZO|1|23SA|G|179
7AZO|1|23SA|A|180
7AZO|1|23SA|A|181
7AZO|1|23SA|C|182
7AZO|1|23SA|U|183
7AZO|1|23SA|G|184
*
7AZO|1|23SA|C|191
7AZO|1|23SA|U|192
7AZO|1|23SA|C|193
7AZO|1|23SA|A|194
7AZO|1|23SA|G|195
7AZO|1|23SA|U|196
7AZO|1|23SA|A|197
7AZO|1|23SA|C|198
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain L15A
- 50S ribosomal protein L15
- Chain L28A
- 50S ribosomal protein L28
- Chain L34A
- 50S ribosomal protein L34
- Chain L35A
- 50S ribosomal protein L35
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