IL_7AZO_133

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_133 not in the Motif Atlas

Geometric match to IL_7RQB_013

Geometric discrepancy: 0.077

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

7AZO|1|23SA|U|318
7AZO|1|23SA|A|319
7AZO|1|23SA|G|320
*
7AZO|1|23SA|C|368
7AZO|1|23SA|G|369
7AZO|1|23SA|A|370
7AZO|1|23SA|A|371
7AZO|1|23SA|A|372

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L24A

50S ribosomal protein L24