IL_7AZO_159

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

7AZO|1|23SA|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_159 not in the Motif Atlas

Geometric match to IL_7RQB_041

Geometric discrepancy: 0.101

The information below is about IL_7RQB_041

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_43275.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

7AZO|1|23SA|G|1079
7AZO|1|23SA|A|1080
7AZO|1|23SA|U|1081
7AZO|1|23SA|G|1082
*
7AZO|1|23SA|C|1169
7AZO|1|23SA|G|1170
7AZO|1|23SA|C|1171

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L16A

50S ribosomal protein L16

Chain L6A

50S ribosomal protein L6