IL_7AZO_201

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_201 not in the Motif Atlas

Geometric match to IL_3RG5_002

Geometric discrepancy: 0.2119

The information below is about IL_3RG5_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

7AZO|1|23SA|C|2133
7AZO|1|23SA|U|2134
7AZO|1|23SA|G|2135
*
7AZO|1|23SA|C|2204
7AZO|1|23SA|U|2205
7AZO|1|23SA|G|2206

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain ESIA

Transfer RNA; tRNA