IL_7AZO_218

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

7AZO|1|23SA|A|2617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_218 not in the Motif Atlas

Geometric match to IL_7RQB_101

Geometric discrepancy: 0.1498

The information below is about IL_7RQB_101

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

7AZO|1|23SA|C|2606
7AZO|1|23SA|G|2607
*
7AZO|1|23SA|C|2616
7AZO|1|23SA|A|2617
7AZO|1|23SA|G|2618

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain ASIA

Transfer RNA; tRNA

Chain L27A

50S ribosomal protein L27

Chain L2A

50S ribosomal protein L2

Chain PSIA

Transfer RNA; tRNA