IL_7AZO_234
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAGUAG*CGAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_234 not in the Motif Atlas
- Geometric match to IL_7RQB_007
- Geometric discrepancy: 0.06
- The information below is about IL_7RQB_007
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
7AZO|1|23SB|U|229
7AZO|1|23SB|G|230
7AZO|1|23SB|A|231
7AZO|1|23SB|G|232
7AZO|1|23SB|U|233
7AZO|1|23SB|A|234
7AZO|1|23SB|G|235
*
7AZO|1|23SB|C|243
7AZO|1|23SB|G|244
7AZO|1|23SB|A|245
7AZO|1|23SB|A|246
7AZO|1|23SB|A|247
7AZO|1|23SB|G|248
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L15B
- 50S ribosomal protein L15
- Chain L35B
- 50S ribosomal protein L35
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