IL_7AZO_244
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 7AZO|1|23SB|G|850, 7AZO|1|23SB|G|854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_244 not in the Motif Atlas
- Geometric match to IL_4WF9_021
- Geometric discrepancy: 0.0887
- The information below is about IL_4WF9_021
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_54041.2
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZO|1|23SB|G|723
7AZO|1|23SB|A|724
7AZO|1|23SB|A|725
7AZO|1|23SB|A|726
7AZO|1|23SB|C|727
*
7AZO|1|23SB|G|848
7AZO|1|23SB|A|849
7AZO|1|23SB|G|850
7AZO|1|23SB|A|851
7AZO|1|23SB|U|852
7AZO|1|23SB|A|853
7AZO|1|23SB|G|854
7AZO|1|23SB|C|855
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L15B
- 50S ribosomal protein L15
- Chain L4B
- 50S ribosomal protein L4
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